STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA63094.1General secretion pathway protein M. (177 aa)    
Predicted Functional Partners:
SEA63070.1
GspL domain-containing protein.
  
 
 0.934
SEA63048.1
General secretion pathway protein K.
  
  
 0.777
SDZ81436.1
GspL domain-containing protein.
  
 
 0.755
SEA63111.1
Type II secretion system protein N.
       0.729
SEA63032.1
General secretion pathway protein J.
     
 0.672
SEA63008.1
General secretion pathway protein I.
     
 0.670
SEA62985.1
General secretion pathway protein H.
       0.583
SEA62961.1
General secretion pathway protein G.
     
 0.572
SEA62940.1
General secretion pathway protein F.
  
  
 0.523
SEA62916.1
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  
 0.509
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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