STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA67874.1Polysaccharide deacetylase. (346 aa)    
Predicted Functional Partners:
SEA24299.1
Hypothetical protein.
  
 
 0.821
SEA62116.1
Hypothetical protein.
  
 
 0.820
SEA67896.1
Bax protein.
 
     0.788
SDZ76964.1
Bax protein.
 
     0.782
SEA67852.1
Hypothetical protein.
       0.781
SEA67830.1
Histidine triad (HIT) family protein.
       0.700
SEA10643.1
O-antigen ligase.
    
 0.693
SEA71447.1
Tfp pilus assembly protein PilF.
  
  
 0.549
SDZ90032.1
MSHA biogenesis protein MshQ.
  
  
 0.548
SEA45000.1
Hypothetical protein.
    
 0.544
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.