STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA79831.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (724 aa)    
Predicted Functional Partners:
SDZ80057.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.999
SEA27838.1
Signal transduction histidine kinase.
 0.997
SDZ77036.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.996
SDZ83665.1
Response regulator receiver domain-containing protein.
  
 0.996
SEA26062.1
PAS domain-containing protein.
 
 0.996
SEA53516.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.996
SEA21911.1
PAS domain S-box-containing protein.
 
0.995
SDZ80995.1
PAS domain S-box-containing protein.
 
 0.994
SDZ80108.1
PAS domain S-box-containing protein.
0.993
SEA35029.1
PAS domain S-box-containing protein.
 0.993
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.