STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA80725.1C4-dicarboxylate transporter, DctM subunit. (428 aa)    
Predicted Functional Partners:
SEA80707.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.993
SEA80682.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
 0.986
SEA80654.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
 0.983
SEA78446.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.892
SEA29271.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.876
SEA29306.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.874
SEA08826.1
Tripartite ATP-independent transporter solute receptor, DctP family.
    0.867
SEA78437.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.862
SDZ78827.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
    0.775
SEA08852.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.766
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.