STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA81453.1Type IV pilus assembly protein PilB. (567 aa)    
Predicted Functional Partners:
SEA81414.1
Type IV pilus assembly protein PilC.
 
 0.971
SDZ90232.1
MSHA biogenesis protein MshG.
 
 0.947
SDZ81327.1
General secretion pathway protein F.
 
 0.938
SEA62940.1
General secretion pathway protein F.
 
 0.938
SEA65142.1
Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.858
SDZ81436.1
GspL domain-containing protein.
  
 
 0.819
SEA63070.1
GspL domain-containing protein.
  
 
 0.819
SEA65179.1
Type IV pilus assembly protein PilM.
 
 
 
 0.758
SEA62961.1
General secretion pathway protein G.
 
 0.734
SEA34642.1
Response regulator receiver domain-containing protein.
 
      0.690
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.