STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA81544.1Type IV pilus assembly protein PilY1. (1187 aa)    
Predicted Functional Partners:
SEA81600.1
Type IV pilus assembly protein PilW.
 
  
 0.991
SEA81623.1
Type IV pilus assembly protein PilV.
 
  
 0.988
SEA81578.1
Type IV pilus assembly protein PilX.
 
  
 0.987
SEA81526.1
Type IV pilus assembly protein PilE.
 
  
 0.976
SEA81644.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.946
SEA81510.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.923
SDZ90159.1
MSHA pilin protein MshC.
  
  
 0.887
SEA64730.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
  
 0.786
SDZ90066.1
MSHA biogenesis protein MshP.
  
  
 0.760
SEA65217.1
Type IV pilus assembly protein PilO.
  
  
 0.672
Your Current Organism:
Desulfuromusa kysingii
NCBI taxonomy Id: 37625
Other names: D. kysingii, DSM 7343, strain Kysw2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.