Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI69952.1 | SDI69993.1 | SAMN04487954_10176 | SAMN04487954_10177 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.999 |
SDI69952.1 | SDI72446.1 | SAMN04487954_10176 | SAMN04487954_101149 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Alanine-synthesizing transaminase. | 0.937 |
SDI69952.1 | SDJ29880.1 | SAMN04487954_10176 | SAMN04487954_10435 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.987 |
SDI69952.1 | SDJ37431.1 | SAMN04487954_10176 | SAMN04487954_104220 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Aromatic-amino-acid transaminase. | 0.927 |
SDI69952.1 | fumC | SAMN04487954_10176 | SAMN04487954_106125 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.942 |
SDI69993.1 | SDI69952.1 | SAMN04487954_10177 | SAMN04487954_10176 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.999 |
SDI69993.1 | SDI72446.1 | SAMN04487954_10177 | SAMN04487954_101149 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Alanine-synthesizing transaminase. | 0.930 |
SDI69993.1 | SDJ29880.1 | SAMN04487954_10177 | SAMN04487954_10435 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.993 |
SDI69993.1 | SDJ37431.1 | SAMN04487954_10177 | SAMN04487954_104220 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Aromatic-amino-acid transaminase. | 0.946 |
SDI69993.1 | fumC | SAMN04487954_10177 | SAMN04487954_106125 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.997 |
SDI72129.1 | SDI72446.1 | SAMN04487954_101139 | SAMN04487954_101149 | Glutamate dehydrogenase. | Alanine-synthesizing transaminase. | 0.935 |
SDI72129.1 | SDJ37431.1 | SAMN04487954_101139 | SAMN04487954_104220 | Glutamate dehydrogenase. | Aromatic-amino-acid transaminase. | 0.928 |
SDI72446.1 | SDI69952.1 | SAMN04487954_101149 | SAMN04487954_10176 | Alanine-synthesizing transaminase. | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.937 |
SDI72446.1 | SDI69993.1 | SAMN04487954_101149 | SAMN04487954_10177 | Alanine-synthesizing transaminase. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.930 |
SDI72446.1 | SDI72129.1 | SAMN04487954_101149 | SAMN04487954_101139 | Alanine-synthesizing transaminase. | Glutamate dehydrogenase. | 0.935 |
SDI72446.1 | SDJ19863.1 | SAMN04487954_101149 | SAMN04487954_103311 | Alanine-synthesizing transaminase. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.938 |
SDI72446.1 | SDJ29880.1 | SAMN04487954_101149 | SAMN04487954_10435 | Alanine-synthesizing transaminase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.930 |
SDI72446.1 | SDJ37431.1 | SAMN04487954_101149 | SAMN04487954_104220 | Alanine-synthesizing transaminase. | Aromatic-amino-acid transaminase. | 0.944 |
SDI72446.1 | SDJ52665.1 | SAMN04487954_101149 | SAMN04487954_105171 | Alanine-synthesizing transaminase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.937 |
SDI72446.1 | argA | SAMN04487954_101149 | SAMN04487954_103196 | Alanine-synthesizing transaminase. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.936 |
page 1 of 3