STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI79416.1SEC-C motif-containing protein. (604 aa)    
Predicted Functional Partners:
SDI70982.1
Protein of unknown function.
  
     0.773
SDJ21494.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.769
SDJ91103.1
Phospholipid transport system transporter-binding protein.
  
     0.769
SDI79368.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
       0.768
SDK47416.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
     0.764
SDI76280.1
Hypothetical protein.
  
     0.762
SDI72031.1
Hemerythrin-like domain-containing protein.
  
     0.758
SDK62781.1
Hypothetical protein.
  
     0.756
SDJ38510.1
LPS-assembly lipoprotein.
  
     0.752
SDK22310.1
Hypothetical protein.
  
     0.751
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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