STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI82234.1Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family. (516 aa)    
Predicted Functional Partners:
SDJ59912.1
Glutamate synthase (NADPH/NADH) large chain.
 
0.997
SDJ17260.1
Glutamate synthase (NADPH/NADH) large chain.
 
0.996
SDJ59954.1
Glutamate synthase (NADPH/NADH) small chain.
 0.990
SDJ50545.1
2,4-dienoyl-CoA reductase.
  
 0.979
SDJ17221.1
Glutamate synthase (NADPH/NADH) small chain.
 0.967
SDK63110.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.909
SDJ29683.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.883
SDJ31630.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
    
 0.867
SDJ32188.1
2,4-dienoyl-CoA reductase.
    
 0.858
SDJ92342.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
 0.827
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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