Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI78999.1 | SDI94166.1 | SAMN04487954_101318 | SAMN04487954_102148 | Two-component system, NarL family, sensor histidine kinase BarA. | Enoyl-CoA hydratase. | 0.943 |
SDI78999.1 | SDJ51317.1 | SAMN04487954_101318 | SAMN04487954_105136 | Two-component system, NarL family, sensor histidine kinase BarA. | PAS domain S-box-containing protein. | 0.999 |
SDI78999.1 | SDJ72586.1 | SAMN04487954_101318 | SAMN04487954_107136 | Two-component system, NarL family, sensor histidine kinase BarA. | Signal transduction histidine kinase. | 0.999 |
SDI78999.1 | SDJ93866.1 | SAMN04487954_101318 | SAMN04487954_109145 | Two-component system, NarL family, sensor histidine kinase BarA. | Enoyl-CoA hydratase/carnithine racemase. | 0.943 |
SDI78999.1 | SDJ98077.1 | SAMN04487954_101318 | SAMN04487954_1109 | Two-component system, NarL family, sensor histidine kinase BarA. | PAS domain S-box-containing protein. | 0.999 |
SDI94166.1 | SDI78999.1 | SAMN04487954_102148 | SAMN04487954_101318 | Enoyl-CoA hydratase. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.943 |
SDI94166.1 | SDJ51317.1 | SAMN04487954_102148 | SAMN04487954_105136 | Enoyl-CoA hydratase. | PAS domain S-box-containing protein. | 0.941 |
SDI94166.1 | SDJ72586.1 | SAMN04487954_102148 | SAMN04487954_107136 | Enoyl-CoA hydratase. | Signal transduction histidine kinase. | 0.942 |
SDI94166.1 | SDJ93866.1 | SAMN04487954_102148 | SAMN04487954_109145 | Enoyl-CoA hydratase. | Enoyl-CoA hydratase/carnithine racemase. | 0.939 |
SDI94166.1 | SDJ98077.1 | SAMN04487954_102148 | SAMN04487954_1109 | Enoyl-CoA hydratase. | PAS domain S-box-containing protein. | 0.939 |
SDI94166.1 | SDK14490.1 | SAMN04487954_102148 | SAMN04487954_11222 | Enoyl-CoA hydratase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.854 |
SDI94166.1 | rplQ | SAMN04487954_102148 | SAMN04487954_11746 | Enoyl-CoA hydratase. | LSU ribosomal protein L17P. | 0.851 |
SDI94166.1 | rpmG | SAMN04487954_102148 | SAMN04487954_103316 | Enoyl-CoA hydratase. | LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. | 0.854 |
SDI94166.1 | rpsI | SAMN04487954_102148 | SAMN04487954_10961 | Enoyl-CoA hydratase. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.852 |
SDI94166.1 | rpsP | SAMN04487954_102148 | SAMN04487954_103350 | Enoyl-CoA hydratase. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.852 |
SDJ51317.1 | SDI78999.1 | SAMN04487954_105136 | SAMN04487954_101318 | PAS domain S-box-containing protein. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.999 |
SDJ51317.1 | SDI94166.1 | SAMN04487954_105136 | SAMN04487954_102148 | PAS domain S-box-containing protein. | Enoyl-CoA hydratase. | 0.941 |
SDJ51317.1 | SDJ72586.1 | SAMN04487954_105136 | SAMN04487954_107136 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDJ51317.1 | SDJ93866.1 | SAMN04487954_105136 | SAMN04487954_109145 | PAS domain S-box-containing protein. | Enoyl-CoA hydratase/carnithine racemase. | 0.941 |
SDJ51317.1 | SDJ98077.1 | SAMN04487954_105136 | SAMN04487954_1109 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
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