STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI94166.1Enoyl-CoA hydratase. (263 aa)    
Predicted Functional Partners:
SDI78999.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
  0.943
SDJ72586.1
Signal transduction histidine kinase.
   
  0.942
SDJ51317.1
PAS domain S-box-containing protein.
  
 0.941
SDJ93866.1
Enoyl-CoA hydratase/carnithine racemase.
 
 
0.939
SDJ98077.1
PAS domain S-box-containing protein.
   
 0.939
rpmG
LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.854
SDK14490.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.854
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.852
rpsI
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
    
   0.852
rplQ
LSU ribosomal protein L17P.
    
   0.851
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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