STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ20966.1Catechol 2,3-dioxygenase. (139 aa)    
Predicted Functional Partners:
SDJ20877.1
Transcriptional regulator, MerR family.
       0.644
SDJ20929.1
Cu+-exporting ATPase.
       0.562
SDK08580.1
YHS domain-containing protein.
 
  
  0.538
SDK11146.1
4-hydroxyphenylpyruvate dioxygenase.
     
 0.518
SDJ68109.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
  0.499
nqrF
Na+-transporting NADH:ubiquinone oxidoreductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.
    
  0.483
SDJ31819.1
Ferredoxin-NADP reductase.
    
  0.481
SDK37663.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
  0.481
SDJ18451.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
  0.479
SDK16982.1
Protein of unknown function.
     
 0.449
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.