STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ10673.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SDJ10708.1
Protein of unknown function.
       0.773
SDJ10737.1
Hypothetical protein.
       0.773
SDJ10772.1
Hypothetical protein.
       0.773
SDJ10804.1
Hypothetical protein.
       0.773
SDJ10838.1
Hypothetical protein.
       0.773
SDJ10887.1
Transcriptional regulator, AlpA family.
       0.773
SDJ10923.1
Hypothetical protein.
       0.581
SDJ10606.1
Hypothetical protein.
       0.528
SDJ10642.1
Phage major capsid protein, HK97 family.
       0.528
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.