STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ33299.1Protein of unknown function. (69 aa)    
Predicted Functional Partners:
SDJ33209.1
Hypothetical protein.
       0.744
SDJ33252.1
Flavodoxin.
       0.736
SDJ50828.1
Hypothetical protein.
  
     0.725
SDJ50746.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
     0.537
SDJ63599.1
Uncharacterized membrane protein.
  
     0.515
SDK56759.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
     0.490
SDK56809.1
Hypothetical protein.
  
     0.483
SDJ50784.1
Cytochrome c oxidase accessory protein FixG.
  
     0.458
SDJ49088.1
Acyl-CoA thioesterase FadM.
  
     0.446
SDI74770.1
Glutamine amidotransferase.
  
     0.444
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.