Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI73198.1 | SDI73236.1 | SAMN04487954_101174 | SAMN04487954_101175 | Uncharacterized membrane protein YqjE. | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | 0.986 |
SDI73198.1 | SDJ62435.1 | SAMN04487954_101174 | SAMN04487954_106123 | Uncharacterized membrane protein YqjE. | Hypothetical protein. | 0.534 |
SDI73236.1 | SDI73198.1 | SAMN04487954_101175 | SAMN04487954_101174 | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | Uncharacterized membrane protein YqjE. | 0.986 |
SDI73236.1 | SDJ62435.1 | SAMN04487954_101175 | SAMN04487954_106123 | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | Hypothetical protein. | 0.469 |
SDI73236.1 | SDK16090.1 | SAMN04487954_101175 | SAMN04487954_11263 | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | Osmotically inducible protein OsmC. | 0.624 |
SDJ62435.1 | SDI73198.1 | SAMN04487954_106123 | SAMN04487954_101174 | Hypothetical protein. | Uncharacterized membrane protein YqjE. | 0.534 |
SDJ62435.1 | SDI73236.1 | SAMN04487954_106123 | SAMN04487954_101175 | Hypothetical protein. | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | 0.469 |
SDJ62435.1 | SDJ62464.1 | SAMN04487954_106123 | SAMN04487954_106124 | Hypothetical protein. | Phasin family protein. | 0.631 |
SDJ62435.1 | SDK16090.1 | SAMN04487954_106123 | SAMN04487954_11263 | Hypothetical protein. | Osmotically inducible protein OsmC. | 0.642 |
SDJ62464.1 | SDJ62435.1 | SAMN04487954_106124 | SAMN04487954_106123 | Phasin family protein. | Hypothetical protein. | 0.631 |
SDK16090.1 | SDI73236.1 | SAMN04487954_11263 | SAMN04487954_101175 | Osmotically inducible protein OsmC. | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | 0.624 |
SDK16090.1 | SDJ62435.1 | SAMN04487954_11263 | SAMN04487954_106123 | Osmotically inducible protein OsmC. | Hypothetical protein. | 0.642 |