Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI95862.1 | SDJ72362.1 | SAMN04487954_102192 | SAMN04487954_107130 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | L-lysine 2,3-aminomutase. | 0.464 |
SDJ12175.1 | SDJ72362.1 | SAMN04487954_103104 | SAMN04487954_107130 | Transcriptional regulator, MarR family with acetyltransferase activity. | L-lysine 2,3-aminomutase. | 0.430 |
SDJ19863.1 | SDJ72362.1 | SAMN04487954_103311 | SAMN04487954_107130 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | L-lysine 2,3-aminomutase. | 0.401 |
SDJ72329.1 | SDJ72362.1 | SAMN04487954_107129 | SAMN04487954_107130 | Protein of unknown function. | L-lysine 2,3-aminomutase. | 0.447 |
SDJ72362.1 | SDI95862.1 | SAMN04487954_107130 | SAMN04487954_102192 | L-lysine 2,3-aminomutase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.464 |
SDJ72362.1 | SDJ12175.1 | SAMN04487954_107130 | SAMN04487954_103104 | L-lysine 2,3-aminomutase. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.430 |
SDJ72362.1 | SDJ19863.1 | SAMN04487954_107130 | SAMN04487954_103311 | L-lysine 2,3-aminomutase. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.401 |
SDJ72362.1 | SDJ72329.1 | SAMN04487954_107130 | SAMN04487954_107129 | L-lysine 2,3-aminomutase. | Protein of unknown function. | 0.447 |
SDJ72362.1 | SDJ72405.1 | SAMN04487954_107130 | SAMN04487954_107131 | L-lysine 2,3-aminomutase. | Hypothetical protein. | 0.465 |
SDJ72362.1 | SDK29140.1 | SAMN04487954_107130 | SAMN04487954_11450 | L-lysine 2,3-aminomutase. | lysyl-tRNA synthetase, class 2. | 0.539 |
SDJ72362.1 | SDK58667.1 | SAMN04487954_107130 | SAMN04487954_12010 | L-lysine 2,3-aminomutase. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.871 |
SDJ72362.1 | bioB | SAMN04487954_107130 | SAMN04487954_104306 | L-lysine 2,3-aminomutase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.505 |
SDJ72405.1 | SDJ72362.1 | SAMN04487954_107131 | SAMN04487954_107130 | Hypothetical protein. | L-lysine 2,3-aminomutase. | 0.465 |
SDK29140.1 | SDJ72362.1 | SAMN04487954_11450 | SAMN04487954_107130 | lysyl-tRNA synthetase, class 2. | L-lysine 2,3-aminomutase. | 0.539 |
SDK58667.1 | SDJ72362.1 | SAMN04487954_12010 | SAMN04487954_107130 | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | L-lysine 2,3-aminomutase. | 0.871 |
bioB | SDJ72362.1 | SAMN04487954_104306 | SAMN04487954_107130 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | L-lysine 2,3-aminomutase. | 0.505 |