STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ82184.1DNA-binding transcriptional regulator, GntR family. (230 aa)    
Predicted Functional Partners:
SDJ03019.1
DNA-binding transcriptional regulator, GntR family.
  
     0.767
SDK27409.1
DNA-binding transcriptional regulator, FadR family.
  
    0.767
SDJ82239.1
Peptide/nickel transport system substrate-binding protein.
 
     0.760
SDJ80552.1
GntR family transcriptional regulator, carbon starvation induced regulator.
  
     0.755
SDK03363.1
DNA-binding transcriptional regulator, FadR family.
  
    0.719
SDJ71533.1
DNA-binding transcriptional regulator, FadR family.
  
    0.717
SDJ02870.1
DNA-binding transcriptional regulator, FadR family.
  
    0.712
SDK10685.1
Transcriptional regulator, GntR family.
  
    0.664
SDJ82382.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.617
SDJ82145.1
Uncharacterized conserved protein, tellurite resistance protein B (TerB) family.
       0.596
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.