Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ36429.1 | SDJ84820.1 | SAMN04487954_104194 | SAMN04487954_108175 | Putative peptide zinc metalloprotease protein. | Hypothetical protein. | 0.428 |
SDJ36429.1 | SDJ84855.1 | SAMN04487954_104194 | SAMN04487954_108176 | Putative peptide zinc metalloprotease protein. | Hemolysin-type calcium-binding repeat-containing protein. | 0.590 |
SDJ36429.1 | SDK60151.1 | SAMN04487954_104194 | SAMN04487954_12045 | Putative peptide zinc metalloprotease protein. | Outer membrane protein, adhesin transport system. | 0.685 |
SDJ36429.1 | SDK60319.1 | SAMN04487954_104194 | SAMN04487954_12049 | Putative peptide zinc metalloprotease protein. | Hypothetical protein. | 0.428 |
SDJ84733.1 | SDJ84779.1 | SAMN04487954_108173 | SAMN04487954_108174 | Transglutaminase-like cysteine proteinase BTLCP. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.975 |
SDJ84733.1 | SDJ84820.1 | SAMN04487954_108173 | SAMN04487954_108175 | Transglutaminase-like cysteine proteinase BTLCP. | Hypothetical protein. | 0.767 |
SDJ84733.1 | SDJ84855.1 | SAMN04487954_108173 | SAMN04487954_108176 | Transglutaminase-like cysteine proteinase BTLCP. | Hemolysin-type calcium-binding repeat-containing protein. | 0.650 |
SDJ84733.1 | SDK60151.1 | SAMN04487954_108173 | SAMN04487954_12045 | Transglutaminase-like cysteine proteinase BTLCP. | Outer membrane protein, adhesin transport system. | 0.821 |
SDJ84733.1 | SDK60196.1 | SAMN04487954_108173 | SAMN04487954_12046 | Transglutaminase-like cysteine proteinase BTLCP. | ATP-binding cassette, subfamily C, LapB. | 0.832 |
SDJ84733.1 | SDK60233.1 | SAMN04487954_108173 | SAMN04487954_12047 | Transglutaminase-like cysteine proteinase BTLCP. | Membrane fusion protein, adhesin transport system. | 0.801 |
SDJ84733.1 | SDK60319.1 | SAMN04487954_108173 | SAMN04487954_12049 | Transglutaminase-like cysteine proteinase BTLCP. | Hypothetical protein. | 0.697 |
SDJ84779.1 | SDJ84733.1 | SAMN04487954_108174 | SAMN04487954_108173 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Transglutaminase-like cysteine proteinase BTLCP. | 0.975 |
SDJ84779.1 | SDJ84820.1 | SAMN04487954_108174 | SAMN04487954_108175 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Hypothetical protein. | 0.769 |
SDJ84779.1 | SDJ84855.1 | SAMN04487954_108174 | SAMN04487954_108176 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Hemolysin-type calcium-binding repeat-containing protein. | 0.614 |
SDJ84779.1 | SDK60151.1 | SAMN04487954_108174 | SAMN04487954_12045 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Outer membrane protein, adhesin transport system. | 0.821 |
SDJ84779.1 | SDK60196.1 | SAMN04487954_108174 | SAMN04487954_12046 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | ATP-binding cassette, subfamily C, LapB. | 0.798 |
SDJ84779.1 | SDK60233.1 | SAMN04487954_108174 | SAMN04487954_12047 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Membrane fusion protein, adhesin transport system. | 0.774 |
SDJ84779.1 | SDK60319.1 | SAMN04487954_108174 | SAMN04487954_12049 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Hypothetical protein. | 0.720 |
SDJ84820.1 | SDJ36429.1 | SAMN04487954_108175 | SAMN04487954_104194 | Hypothetical protein. | Putative peptide zinc metalloprotease protein. | 0.428 |
SDJ84820.1 | SDJ84733.1 | SAMN04487954_108175 | SAMN04487954_108173 | Hypothetical protein. | Transglutaminase-like cysteine proteinase BTLCP. | 0.767 |
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