STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK00100.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
SDI95642.1
Predicted lipid carrier protein YhbT, contains SCP2 domain.
 
     0.549
SDI96999.1
Uncharacterized membrane protein SirB2.
 
     0.548
SDK00137.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
       0.530
SDK00042.1
Uncharacterized iron-regulated protein.
       0.522
SDK08221.1
Hypothetical protein.
  
     0.507
SDK07556.1
Hypothetical protein.
  
     0.489
SDI96083.1
Collagenase-like protease, PrtC family.
  
     0.479
SDI97541.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
 
     0.468
SDI97572.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
     0.459
SDJ80904.1
Non-specific serine/threonine protein kinase.
  
     0.412
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.