STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK07556.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SDK07505.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
     0.876
SDK07415.1
Hypothetical protein.
 
     0.852
SDK08391.1
Protein of unknown function.
 
     0.649
SDK15478.1
Outer membrane autotransporter barrel domain-containing protein.
  
     0.569
SDJ60325.1
Transposase.
  
     0.564
SDK56809.1
Hypothetical protein.
  
     0.543
SDK62886.1
Protein of unknown function.
  
     0.542
SDJ60212.1
Zinc-finger of transposase IS204/IS1001/IS1096/IS1165.
  
     0.530
SDJ22114.1
Hypothetical protein.
  
     0.526
SDK07600.1
Transposase.
  
     0.523
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.