Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI80353.1 | SDJ58000.1 | SAMN04487954_101350 | SAMN04487954_1064 | Glutathione S-transferase. | Glutathione S-transferase. | 0.433 |
SDI80353.1 | SDJ77527.1 | SAMN04487954_101350 | SAMN04487954_1089 | Glutathione S-transferase. | Glutathione reductase (NADPH). | 0.586 |
SDI80353.1 | SDK17157.1 | SAMN04487954_101350 | SAMN04487954_11290 | Glutathione S-transferase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.484 |
SDI80353.1 | SDK22355.1 | SAMN04487954_101350 | SAMN04487954_11349 | Glutathione S-transferase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.471 |
SDI80353.1 | SDK51536.1 | SAMN04487954_101350 | SAMN04487954_11815 | Glutathione S-transferase. | Glutathione S-transferase. | 0.644 |
SDI80353.1 | gshB | SAMN04487954_101350 | SAMN04487954_102130 | Glutathione S-transferase. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.648 |
SDI80353.1 | rpoA | SAMN04487954_101350 | SAMN04487954_11747 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
SDI80353.1 | rpoB | SAMN04487954_101350 | SAMN04487954_11779 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.706 |
SDI80353.1 | rpoC | SAMN04487954_101350 | SAMN04487954_11778 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.856 |
SDI80353.1 | rpoZ | SAMN04487954_101350 | SAMN04487954_1025 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.796 |
SDJ58000.1 | SDI80353.1 | SAMN04487954_1064 | SAMN04487954_101350 | Glutathione S-transferase. | Glutathione S-transferase. | 0.433 |
SDJ58000.1 | SDJ77527.1 | SAMN04487954_1064 | SAMN04487954_1089 | Glutathione S-transferase. | Glutathione reductase (NADPH). | 0.947 |
SDJ58000.1 | SDK17157.1 | SAMN04487954_1064 | SAMN04487954_11290 | Glutathione S-transferase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.757 |
SDJ58000.1 | SDK22355.1 | SAMN04487954_1064 | SAMN04487954_11349 | Glutathione S-transferase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.930 |
SDJ58000.1 | SDK51536.1 | SAMN04487954_1064 | SAMN04487954_11815 | Glutathione S-transferase. | Glutathione S-transferase. | 0.774 |
SDJ58000.1 | gshB | SAMN04487954_1064 | SAMN04487954_102130 | Glutathione S-transferase. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.939 |
SDJ58000.1 | rpoA | SAMN04487954_1064 | SAMN04487954_11747 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
SDJ58000.1 | rpoB | SAMN04487954_1064 | SAMN04487954_11779 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.706 |
SDJ58000.1 | rpoC | SAMN04487954_1064 | SAMN04487954_11778 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.856 |
SDJ58000.1 | rpoZ | SAMN04487954_1064 | SAMN04487954_1025 | Glutathione S-transferase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.764 |
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