STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK61747.1Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (419 aa)    
Predicted Functional Partners:
SDK61792.1
Fe-S cluster assembly ATP-binding protein.
 
  
 0.994
SDK61770.1
Fe-S cluster assembly protein SufD.
 
 
 0.990
SDJ77925.1
Cysteine desulfuration protein SufE.
 
 0.982
SDK61814.1
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.982
SDK61669.1
Probable FeS assembly SUF system protein SufT.
 
  
 0.939
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
   
 0.933
SDK01834.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.873
SDK61642.1
SanA protein.
       0.786
SDK23131.1
Cysteine desulfurase.
    
0.760
SDJ19636.1
Thioredoxin reductase (NADPH).
 
 
  0.733
Your Current Organism:
Halomonas gudaonensis
NCBI taxonomy Id: 376427
Other names: CGMCC 1.6133, H. gudaonensis, Halomonas gudaonensis Wang et al. 2007, LMG 23610, LMG:23610, strain SL014B-69
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.