Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ17260.1 | SDJ46723.1 | SAMN04487954_103240 | SAMN04487954_10512 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand DNA-binding protein. | 0.431 |
SDJ17260.1 | SDJ59912.1 | SAMN04487954_103240 | SAMN04487954_10655 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SDJ17260.1 | SDK47448.1 | SAMN04487954_103240 | SAMN04487954_11743 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.431 |
SDJ17260.1 | SDK68852.1 | SAMN04487954_103240 | SAMN04487954_12351 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand DNA-binding protein. | 0.431 |
SDJ17260.1 | SDK68894.1 | SAMN04487954_103240 | SAMN04487954_12352 | Glutamate synthase (NADPH/NADH) large chain. | DNA topoisomerase-3. | 0.868 |
SDJ17260.1 | polA | SAMN04487954_103240 | SAMN04487954_11169 | Glutamate synthase (NADPH/NADH) large chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.616 |
SDJ17260.1 | rpoC | SAMN04487954_103240 | SAMN04487954_11778 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.435 |
SDJ46723.1 | SDJ17260.1 | SAMN04487954_10512 | SAMN04487954_103240 | Single-strand DNA-binding protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.431 |
SDJ46723.1 | SDJ59912.1 | SAMN04487954_10512 | SAMN04487954_10655 | Single-strand DNA-binding protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.431 |
SDJ46723.1 | SDJ59987.1 | SAMN04487954_10512 | SAMN04487954_10657 | Single-strand DNA-binding protein. | ATP-dependent DNA helicase, RecQ-like. | 0.426 |
SDJ46723.1 | SDK68894.1 | SAMN04487954_10512 | SAMN04487954_12352 | Single-strand DNA-binding protein. | DNA topoisomerase-3. | 0.951 |
SDJ46723.1 | polA | SAMN04487954_10512 | SAMN04487954_11169 | Single-strand DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.517 |
SDJ59912.1 | SDJ17260.1 | SAMN04487954_10655 | SAMN04487954_103240 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate synthase (NADPH/NADH) large chain. | 0.999 |
SDJ59912.1 | SDJ46723.1 | SAMN04487954_10655 | SAMN04487954_10512 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand DNA-binding protein. | 0.431 |
SDJ59912.1 | SDK47448.1 | SAMN04487954_10655 | SAMN04487954_11743 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.431 |
SDJ59912.1 | SDK68852.1 | SAMN04487954_10655 | SAMN04487954_12351 | Glutamate synthase (NADPH/NADH) large chain. | Single-strand DNA-binding protein. | 0.431 |
SDJ59912.1 | SDK68894.1 | SAMN04487954_10655 | SAMN04487954_12352 | Glutamate synthase (NADPH/NADH) large chain. | DNA topoisomerase-3. | 0.868 |
SDJ59912.1 | polA | SAMN04487954_10655 | SAMN04487954_11169 | Glutamate synthase (NADPH/NADH) large chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.616 |
SDJ59912.1 | rpoC | SAMN04487954_10655 | SAMN04487954_11778 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.435 |
SDJ59987.1 | SDJ46723.1 | SAMN04487954_10657 | SAMN04487954_10512 | ATP-dependent DNA helicase, RecQ-like. | Single-strand DNA-binding protein. | 0.426 |
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