STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8FS70Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (646 aa)    
Predicted Functional Partners:
A0A0L8GCH3
Uncharacterized protein.
   
 0.983
A0A0L8H8W3
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.959
A0A0L8I874
Uncharacterized protein.
    
 0.957
A0A0L8GLH7
Uncharacterized protein.
     
 0.941
A0A0L8H597
Uncharacterized protein.
   
 0.895
A0A0L8G113
Uncharacterized protein.
   
 0.894
A0A0L8IAM3
Uncharacterized protein.
    
 0.801
A0A0L8G4F2
Uncharacterized protein.
    
 0.799
A0A0L8HLD6
Uncharacterized protein.
    
 0.746
A0A0L8HMP5
Uncharacterized protein.
    
 0.746
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.