A0A0L8G2H7 protein (Octopus bimaculoides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L8G2H7

Uncharacterized protein. (333 aa)

Predicted Functional Partners:

A0A0L8FJ40

0.970

A0A0L8GFT9

0.959

A0A0L8IFH5

0.898

A0A0L8FS14

0.879

A0A0L8GE96

0.878

A0A0L8GU16

0.873

A0A0L8I871

0.873

A0A0L8H7J0

0.871

A0A0L8I185

0.864

A0A0L8H509

0.862

Your Current Organism:

Octopus bimaculoides

NCBI taxonomy Id: 37653
Other names: O. bimaculoides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L8FJ40	A0A0L8FS14	Uncharacterized protein.	PCI domain-containing protein.	0.933
A0A0L8FJ40	A0A0L8G2H7	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A0L8FJ40	A0A0L8GFT9	Uncharacterized protein.	VWFA domain-containing protein.	0.923
A0A0L8FJ40	A0A0L8GU16	Uncharacterized protein.	RPN13_C domain-containing protein.	0.875
A0A0L8FJ40	A0A0L8H509	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A0L8FJ40	A0A0L8H7J0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.507
A0A0L8FJ40	A0A0L8I185	Uncharacterized protein.	AAA domain-containing protein.	0.885
A0A0L8FJ40	A0A0L8I871	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.972
A0A0L8FJ40	A0A0L8IFH5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.967
A0A0L8FS14	A0A0L8FJ40	PCI domain-containing protein.	Uncharacterized protein.	0.933
A0A0L8FS14	A0A0L8G2H7	PCI domain-containing protein.	Uncharacterized protein.	0.879
A0A0L8FS14	A0A0L8GFT9	PCI domain-containing protein.	VWFA domain-containing protein.	0.999
A0A0L8FS14	A0A0L8GU16	PCI domain-containing protein.	RPN13_C domain-containing protein.	0.995
A0A0L8FS14	A0A0L8H509	PCI domain-containing protein.	Uncharacterized protein.	0.952
A0A0L8FS14	A0A0L8I185	PCI domain-containing protein.	AAA domain-containing protein.	0.997
A0A0L8FS14	A0A0L8I871	PCI domain-containing protein.	Ubiquitin-like domain-containing protein.	0.960
A0A0L8FS14	A0A0L8IFH5	PCI domain-containing protein.	Ubiquitin-like domain-containing protein.	0.945
A0A0L8G2H7	A0A0L8FJ40	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A0L8G2H7	A0A0L8FS14	Uncharacterized protein.	PCI domain-containing protein.	0.879
A0A0L8G2H7	A0A0L8GE96	Uncharacterized protein.	Uncharacterized protein.	0.878