A0A0L8G7K4 protein (Octopus bimaculoides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L8G7K4

Uncharacterized protein. (229 aa)

Predicted Functional Partners:

A0A0L8GBE8

0.587

A0A0L8I593

0.558

A0A0L8H393

0.552

A0A0L8GH08

0.488

A0A0L8G036

0.459

A0A0L8FF60

0.458

A0A0L8FQ63

0.458

A0A0L8FUV0

0.458

A0A0L8H454

0.458

A0A0L8H5M7

0.458

Your Current Organism:

Octopus bimaculoides

NCBI taxonomy Id: 37653
Other names: O. bimaculoides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L8FF60	A0A0L8G7K4	PhoLip_ATPase_N domain-containing protein.	Uncharacterized protein.	0.458
A0A0L8FF60	A0A0L8GH08	PhoLip_ATPase_N domain-containing protein.	Uncharacterized protein; Belongs to the CDC50/LEM3 family.	0.717
A0A0L8FQ63	A0A0L8G7K4	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Uncharacterized protein.	0.458
A0A0L8FQ63	A0A0L8GH08	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Uncharacterized protein; Belongs to the CDC50/LEM3 family.	0.717
A0A0L8FUV0	A0A0L8G7K4	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A0L8FUV0	A0A0L8GH08	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDC50/LEM3 family.	0.717
A0A0L8G036	A0A0L8G7K4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.459
A0A0L8G036	A0A0L8H393	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.465
A0A0L8G7K4	A0A0L8FF60	Uncharacterized protein.	PhoLip_ATPase_N domain-containing protein.	0.458
A0A0L8G7K4	A0A0L8FQ63	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.458
A0A0L8G7K4	A0A0L8FUV0	Uncharacterized protein.	Uncharacterized protein.	0.458
A0A0L8G7K4	A0A0L8G036	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.459
A0A0L8G7K4	A0A0L8GBE8	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A0L8G7K4	A0A0L8GH08	Uncharacterized protein.	Uncharacterized protein; Belongs to the CDC50/LEM3 family.	0.488
A0A0L8G7K4	A0A0L8H393	Uncharacterized protein.	Uncharacterized protein.	0.552
A0A0L8G7K4	A0A0L8H454	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.458
A0A0L8G7K4	A0A0L8H5M7	Uncharacterized protein.	PhoLip_ATPase_N domain-containing protein.	0.458
A0A0L8G7K4	A0A0L8I593	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A0L8GBE8	A0A0L8G7K4	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A0L8GH08	A0A0L8FF60	Uncharacterized protein; Belongs to the CDC50/LEM3 family.	PhoLip_ATPase_N domain-containing protein.	0.717