A0A0L8GGG6 protein (Octopus bimaculoides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L8GGG6

Glyco_18 domain-containing protein. (190 aa)

Predicted Functional Partners:

A0A0L8G733

0.900

A0A0L8HTV5

0.900

A0A0L8G6Q0

0.733

A0A0L8GMR0

0.733

A0A0L8HJ27

0.733

A0A0L8HY13

0.733

A0A0L8I6U2

0.733

A0A0L8IG64

0.733

A0A0L8GRC5

0.617

A0A0L8HR32

0.570

Your Current Organism:

Octopus bimaculoides

NCBI taxonomy Id: 37653
Other names: O. bimaculoides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L8G6Q0	A0A0L8G733	Glyco_hydro_20 domain-containing protein.	Uncharacterized protein.	0.900
A0A0L8G6Q0	A0A0L8GGG6	Glyco_hydro_20 domain-containing protein.	Glyco_18 domain-containing protein.	0.733
A0A0L8G6Q0	A0A0L8HTV5	Glyco_hydro_20 domain-containing protein.	BcrAD_BadFG domain-containing protein.	0.906
A0A0L8G733	A0A0L8G6Q0	Uncharacterized protein.	Glyco_hydro_20 domain-containing protein.	0.900
A0A0L8G733	A0A0L8GGG6	Uncharacterized protein.	Glyco_18 domain-containing protein.	0.900
A0A0L8G733	A0A0L8GMR0	Uncharacterized protein.	CHB_HEX domain-containing protein.	0.900
A0A0L8G733	A0A0L8HJ27	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A0L8G733	A0A0L8HTV5	Uncharacterized protein.	BcrAD_BadFG domain-containing protein.	0.907
A0A0L8G733	A0A0L8HY13	Uncharacterized protein.	Beta-hexosaminidase.	0.900
A0A0L8G733	A0A0L8I6U2	Uncharacterized protein.	CHB_HEX domain-containing protein.	0.900
A0A0L8G733	A0A0L8IG64	Uncharacterized protein.	Chitin-binding type-2 domain-containing protein.	0.900
A0A0L8GGG6	A0A0L8G6Q0	Glyco_18 domain-containing protein.	Glyco_hydro_20 domain-containing protein.	0.733
A0A0L8GGG6	A0A0L8G733	Glyco_18 domain-containing protein.	Uncharacterized protein.	0.900
A0A0L8GGG6	A0A0L8GMR0	Glyco_18 domain-containing protein.	CHB_HEX domain-containing protein.	0.733
A0A0L8GGG6	A0A0L8GRC5	Glyco_18 domain-containing protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.617
A0A0L8GGG6	A0A0L8HJ27	Glyco_18 domain-containing protein.	Uncharacterized protein.	0.733
A0A0L8GGG6	A0A0L8HR32	Glyco_18 domain-containing protein.	Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.	0.570
A0A0L8GGG6	A0A0L8HTV5	Glyco_18 domain-containing protein.	BcrAD_BadFG domain-containing protein.	0.900
A0A0L8GGG6	A0A0L8HY13	Glyco_18 domain-containing protein.	Beta-hexosaminidase.	0.733
A0A0L8GGG6	A0A0L8I6U2	Glyco_18 domain-containing protein.	CHB_HEX domain-containing protein.	0.733