STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8GJW0BTB domain-containing protein; Belongs to the potassium channel family. (600 aa)    
Predicted Functional Partners:
A0A0L8FZE4
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.933
A0A0L8HTW6
KOW domain-containing protein.
  
 0.763
A0A0L8G2J8
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.751
A0A0L8HCQ3
Ribosomal_L23eN domain-containing protein.
   
 0.750
A0A0L8GA56
Uncharacterized protein.
   
 0.747
A0A0L8FUP3
TRASH domain-containing protein.
   
 0.745
A0A0L8HXT9
Uncharacterized protein.
   
 0.741
A0A0L8GN64
Uncharacterized protein.
   
 0.739
A0A0L8FR32
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.725
A0A0L8HFV3
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.718
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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