A0A0L8GTV1 protein (Octopus bimaculoides) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0L8GTV1

TFIID_20kDa domain-containing protein. (157 aa)

Predicted Functional Partners:

A0A0L8FHD8

0.998

A0A0L8FKD9

0.998

A0A0L8GD51

0.998

A0A0L8GQE4

0.998

A0A0L8GYV8

0.998

A0A0L8GZW8

0.998

A0A0L8H309

0.998

A0A0L8HIK4

0.998

A0A0L8I135

0.998

A0A0L8I0L8

0.996

Your Current Organism:

Octopus bimaculoides

NCBI taxonomy Id: 37653
Other names: O. bimaculoides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0L8FHD8	A0A0L8FKD9	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFH domain-containing protein.	0.998
A0A0L8FHD8	A0A0L8GD51	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.998
A0A0L8FHD8	A0A0L8GQE4	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF domain-containing protein.	0.998
A0A0L8FHD8	A0A0L8GTV1	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TFIID_20kDa domain-containing protein.	0.998
A0A0L8FHD8	A0A0L8GYV8	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Peptidase_M1 domain-containing protein.	0.998
A0A0L8FHD8	A0A0L8GZW8	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.998
A0A0L8FHD8	A0A0L8H309	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.998
A0A0L8FHD8	A0A0L8HIK4	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.998
A0A0L8FHD8	A0A0L8I0L8	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	SGF29 C-terminal domain-containing protein.	0.986
A0A0L8FHD8	A0A0L8I135	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAFII55_N domain-containing protein.	0.998
A0A0L8FKD9	A0A0L8FHD8	TAFH domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.998
A0A0L8FKD9	A0A0L8GD51	TAFH domain-containing protein.	Uncharacterized protein.	0.998
A0A0L8FKD9	A0A0L8GQE4	TAFH domain-containing protein.	TAF domain-containing protein.	0.998
A0A0L8FKD9	A0A0L8GTV1	TAFH domain-containing protein.	TFIID_20kDa domain-containing protein.	0.998
A0A0L8FKD9	A0A0L8GYV8	TAFH domain-containing protein.	Peptidase_M1 domain-containing protein.	0.998
A0A0L8FKD9	A0A0L8GZW8	TAFH domain-containing protein.	Uncharacterized protein.	0.998
A0A0L8FKD9	A0A0L8H309	TAFH domain-containing protein.	Uncharacterized protein.	0.998
A0A0L8FKD9	A0A0L8HIK4	TAFH domain-containing protein.	Uncharacterized protein.	0.998
A0A0L8FKD9	A0A0L8I135	TAFH domain-containing protein.	TAFII55_N domain-containing protein.	0.998
A0A0L8GD51	A0A0L8FHD8	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.998