Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0L8FS70 | A0A0L8G144 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3GAP2_N domain-containing protein. | 0.588 |
A0A0L8FS70 | A0A0L8G1N3 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3GAP2_C domain-containing protein. | 0.588 |
A0A0L8FS70 | A0A0L8GV00 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.731 |
A0A0L8FS70 | A0A0L8GWC3 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.717 |
A0A0L8FS70 | A0A0L8H8W3 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.959 |
A0A0L8FS70 | A0A0L8HHL2 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.684 |
A0A0L8FS70 | A0A0L8II30 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.710 |
A0A0L8G0P8 | A0A0L8GV00 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Uncharacterized protein. | 0.836 |
A0A0L8G144 | A0A0L8FS70 | RAB3GAP2_N domain-containing protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.588 |
A0A0L8G144 | A0A0L8G1N3 | RAB3GAP2_N domain-containing protein. | RAB3GAP2_C domain-containing protein. | 0.561 |
A0A0L8G144 | A0A0L8GV00 | RAB3GAP2_N domain-containing protein. | Uncharacterized protein. | 0.771 |
A0A0L8G144 | A0A0L8GWC3 | RAB3GAP2_N domain-containing protein. | Uncharacterized protein. | 0.987 |
A0A0L8G144 | A0A0L8HHL2 | RAB3GAP2_N domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.649 |
A0A0L8G144 | A0A0L8II30 | RAB3GAP2_N domain-containing protein. | Uncharacterized protein. | 0.632 |
A0A0L8G1N3 | A0A0L8FS70 | RAB3GAP2_C domain-containing protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.588 |
A0A0L8G1N3 | A0A0L8G144 | RAB3GAP2_C domain-containing protein. | RAB3GAP2_N domain-containing protein. | 0.561 |
A0A0L8G1N3 | A0A0L8GV00 | RAB3GAP2_C domain-containing protein. | Uncharacterized protein. | 0.771 |
A0A0L8G1N3 | A0A0L8GWC3 | RAB3GAP2_C domain-containing protein. | Uncharacterized protein. | 0.984 |
A0A0L8G1N3 | A0A0L8HHL2 | RAB3GAP2_C domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.649 |
A0A0L8G1N3 | A0A0L8II30 | RAB3GAP2_C domain-containing protein. | Uncharacterized protein. | 0.632 |
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