STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8H6R7F-BAR domain-containing protein. (139 aa)    
Predicted Functional Partners:
A0A0L8IEW8
Uncharacterized protein.
   
 0.669
A0A0L8FHJ8
Uncharacterized protein.
   
 0.610
A0A0L8GTJ6
Uncharacterized protein.
   
 0.610
A0A0L8GTK2
Uncharacterized protein.
   
 0.610
A0A0L8GU92
Uncharacterized protein.
   
 0.610
A0A0L8GUV8
Uncharacterized protein.
   
 0.610
A0A0L8HSW0
WSC domain-containing protein.
   
 0.610
A0A0L8FKS0
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.509
A0A0L8IG11
Uncharacterized protein.
    
 0.482
A0A0L8FI26
DUF2013 domain-containing protein.
    
 
 0.452
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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