STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8HEI2Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)    
Predicted Functional Partners:
A0A0L8GI48
RRM domain-containing protein.
   
 0.998
A0A0L8GRP6
TOG domain-containing protein.
    
 0.997
A0A0L8HN36
PSP domain-containing protein.
    
 0.997
A0A0L8HYX4
CPSF_A domain-containing protein.
   
 0.997
A0A0L8I5J4
RRM domain-containing protein.
   
 0.997
A0A0L8I1D7
Matrin-type domain-containing protein.
   
 0.994
A0A0L8HPN0
Uncharacterized protein.
    
 0.992
A0A0L8FUD9
Small nuclear ribonucleoprotein Sm D2.
   
 0.990
A0A0L8IHU3
Matrin-type domain-containing protein.
   
 0.989
A0A0L8I707
Uncharacterized protein.
   
 0.986
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.