STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8HYA5YTH domain-containing protein. (672 aa)    
Predicted Functional Partners:
A0A0L8HXL4
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.893
A0A0L8FNF5
WD_REPEATS_REGION domain-containing protein.
    
 
 0.885
A0A0L8HQX3
Suf domain-containing protein.
    
 
 0.880
A0A0L8HDV6
CPSF_A domain-containing protein.
    
 
 0.875
A0A0L8FR03
Uncharacterized protein.
    
 
 0.767
A0A0L8GM28
Uncharacterized protein.
    
 
 0.767
A0A0L8GCI0
Fip1 domain-containing protein.
   
 
 0.761
A0A0L8G4P3
Uncharacterized protein; Belongs to the MT-A70-like family.
  
 
 0.743
A0A0L8H6R6
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 
 0.708
A0A0L8G1B4
Uncharacterized protein; Belongs to the MT-A70-like family.
   
 
 0.680
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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