STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0L8I234PX domain-containing protein. (461 aa)    
Predicted Functional Partners:
A0A0L8H2I1
Uncharacterized protein.
    
 
 0.910
A0A0L8GPB1
Uncharacterized protein.
    
 
 0.798
A0A0L8FMJ0
Uncharacterized protein.
   
 
 0.761
A0A0L8HLA5
Uncharacterized protein.
    
 
 0.681
A0A0L8GVM9
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.646
A0A0L8H0E1
Sorting nexin; Involved in several stages of intracellular trafficking.
    
 
 0.627
A0A0L8GX49
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.624
A0A0L8FHL3
Uncharacterized protein.
   
  
 0.582
A0A0L8HU92
Syntaxin-18_N domain-containing protein.
      
 0.564
A0A0L8HIY0
Vps5 domain-containing protein.
   
 
 0.534
Your Current Organism:
Octopus bimaculoides
NCBI taxonomy Id: 37653
Other names: O. bimaculoides
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