Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0L8FS70 | A0A0L8GV00 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.731 |
A0A0L8FS70 | A0A0L8GWC3 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.717 |
A0A0L8FS70 | A0A0L8HHL2 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.684 |
A0A0L8FS70 | A0A0L8I2G0 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.443 |
A0A0L8FS70 | A0A0L8II30 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.710 |
A0A0L8GNL8 | A0A0L8GV00 | Uncharacterized protein. | Uncharacterized protein. | 0.648 |
A0A0L8GNL8 | A0A0L8GWC3 | Uncharacterized protein. | Uncharacterized protein. | 0.680 |
A0A0L8GNL8 | A0A0L8I2G0 | Uncharacterized protein. | Uncharacterized protein. | 0.414 |
A0A0L8GNL8 | A0A0L8II30 | Uncharacterized protein. | Uncharacterized protein. | 0.662 |
A0A0L8GV00 | A0A0L8FS70 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.731 |
A0A0L8GV00 | A0A0L8GNL8 | Uncharacterized protein. | Uncharacterized protein. | 0.648 |
A0A0L8GV00 | A0A0L8GWC3 | Uncharacterized protein. | Uncharacterized protein. | 0.860 |
A0A0L8GV00 | A0A0L8HHL2 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.867 |
A0A0L8GV00 | A0A0L8I2G0 | Uncharacterized protein. | Uncharacterized protein. | 0.606 |
A0A0L8GV00 | A0A0L8II30 | Uncharacterized protein. | Uncharacterized protein. | 0.730 |
A0A0L8GWC3 | A0A0L8FS70 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.717 |
A0A0L8GWC3 | A0A0L8GNL8 | Uncharacterized protein. | Uncharacterized protein. | 0.680 |
A0A0L8GWC3 | A0A0L8GV00 | Uncharacterized protein. | Uncharacterized protein. | 0.860 |
A0A0L8GWC3 | A0A0L8HHL2 | Uncharacterized protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.687 |
A0A0L8GWC3 | A0A0L8I2G0 | Uncharacterized protein. | Uncharacterized protein. | 0.935 |
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