Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR55695.1 | SFR55708.1 | SAMN05661086_00104 | SAMN05661086_00105 | Formate C-acetyltransferase. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.991 |
SFR55695.1 | SFR55726.1 | SAMN05661086_00104 | SAMN05661086_00106 | Formate C-acetyltransferase. | Hypothetical protein. | 0.448 |
SFR55695.1 | SFR55743.1 | SAMN05661086_00104 | SAMN05661086_00107 | Formate C-acetyltransferase. | Molecular chaperone DnaJ. | 0.448 |
SFR55695.1 | SFR55759.1 | SAMN05661086_00104 | SAMN05661086_00108 | Formate C-acetyltransferase. | Hypothetical protein. | 0.448 |
SFR55695.1 | SFR55777.1 | SAMN05661086_00104 | SAMN05661086_00109 | Formate C-acetyltransferase. | Molecular chaperone HscC; Belongs to the heat shock protein 70 family. | 0.426 |
SFR55695.1 | SFR55793.1 | SAMN05661086_00104 | SAMN05661086_00110 | Formate C-acetyltransferase. | Tetratricopeptide repeat-containing protein. | 0.423 |
SFR55708.1 | SFR55695.1 | SAMN05661086_00105 | SAMN05661086_00104 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Formate C-acetyltransferase. | 0.991 |
SFR55708.1 | SFR55726.1 | SAMN05661086_00105 | SAMN05661086_00106 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Hypothetical protein. | 0.468 |
SFR55708.1 | SFR55743.1 | SAMN05661086_00105 | SAMN05661086_00107 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Molecular chaperone DnaJ. | 0.468 |
SFR55708.1 | SFR55759.1 | SAMN05661086_00105 | SAMN05661086_00108 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Hypothetical protein. | 0.468 |
SFR55708.1 | SFR55777.1 | SAMN05661086_00105 | SAMN05661086_00109 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Molecular chaperone HscC; Belongs to the heat shock protein 70 family. | 0.446 |
SFR55708.1 | SFR55793.1 | SAMN05661086_00105 | SAMN05661086_00110 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Tetratricopeptide repeat-containing protein. | 0.451 |
SFR55726.1 | SFR55695.1 | SAMN05661086_00106 | SAMN05661086_00104 | Hypothetical protein. | Formate C-acetyltransferase. | 0.448 |
SFR55726.1 | SFR55708.1 | SAMN05661086_00106 | SAMN05661086_00105 | Hypothetical protein. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.468 |
SFR55726.1 | SFR55743.1 | SAMN05661086_00106 | SAMN05661086_00107 | Hypothetical protein. | Molecular chaperone DnaJ. | 0.917 |
SFR55726.1 | SFR55759.1 | SAMN05661086_00106 | SAMN05661086_00108 | Hypothetical protein. | Hypothetical protein. | 0.935 |
SFR55726.1 | SFR55777.1 | SAMN05661086_00106 | SAMN05661086_00109 | Hypothetical protein. | Molecular chaperone HscC; Belongs to the heat shock protein 70 family. | 0.727 |
SFR55726.1 | SFR55793.1 | SAMN05661086_00106 | SAMN05661086_00110 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.722 |
SFR55726.1 | SFR55808.1 | SAMN05661086_00106 | SAMN05661086_00111 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.488 |
SFR55743.1 | SFR55695.1 | SAMN05661086_00107 | SAMN05661086_00104 | Molecular chaperone DnaJ. | Formate C-acetyltransferase. | 0.448 |
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