STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR56437.1Small, acid-soluble spore protein, alpha/beta type. (68 aa)    
Predicted Functional Partners:
SFR57142.1
Single-strand binding protein family protein.
  
     0.714
SFR62099.1
Spore coat protein, CotS family.
  
     0.585
SFR56416.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.558
SFR62181.1
LysM domain-containing protein.
  
     0.551
SFR56400.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
       0.533
hslO
Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
  
    0.519
SFR84479.1
Protein of unknown function.
  
     0.517
SFR67577.1
Stage III sporulation protein AE.
  
     0.513
SFR96180.1
Sporulation protein YqfC.
  
     0.493
SFR67621.1
Stage III sporulation protein AA.
  
     0.490
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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