STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR58533.1Protein N-acetyltransferase, RimJ/RimL family. (158 aa)    
Predicted Functional Partners:
SFR58562.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase.
 
 0.994
SFR58631.1
N,N'-diacetyllegionaminate synthase.
 
 
 0.927
SFR58498.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
 
   
 0.923
SFR58484.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.922
SFR57923.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.907
SFR58512.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
     0.893
SFR58802.1
N-acetylneuraminate synthase.
 
 
 0.784
SFR58617.1
Biotin carboxylase.
    
  0.780
SFR58547.1
Regulator of RNase E activity RraA.
       0.773
SFR58583.1
Amidohydrolase.
       0.773
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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