Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR55442.1 | SFR67291.1 | SAMN05661086_00089 | SAMN05661086_00848 | Hypothetical protein. | phosphate:Na+ symporter. | 0.419 |
SFR67280.1 | SFR67291.1 | SAMN05661086_00847 | SAMN05661086_00848 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | phosphate:Na+ symporter. | 0.494 |
SFR67280.1 | pgk | SAMN05661086_00847 | SAMN05661086_00846 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.999 |
SFR67291.1 | SFR55442.1 | SAMN05661086_00848 | SAMN05661086_00089 | phosphate:Na+ symporter. | Hypothetical protein. | 0.419 |
SFR67291.1 | SFR67280.1 | SAMN05661086_00848 | SAMN05661086_00847 | phosphate:Na+ symporter. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.494 |
SFR67291.1 | SFR67300.1 | SAMN05661086_00848 | SAMN05661086_00849 | phosphate:Na+ symporter. | Coat F domain-containing protein. | 0.496 |
SFR67291.1 | SFR67313.1 | SAMN05661086_00848 | SAMN05661086_00850 | phosphate:Na+ symporter. | Hypothetical protein. | 0.489 |
SFR67291.1 | pgk | SAMN05661086_00848 | SAMN05661086_00846 | phosphate:Na+ symporter. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.401 |
SFR67300.1 | SFR67291.1 | SAMN05661086_00849 | SAMN05661086_00848 | Coat F domain-containing protein. | phosphate:Na+ symporter. | 0.496 |
SFR67300.1 | SFR67313.1 | SAMN05661086_00849 | SAMN05661086_00850 | Coat F domain-containing protein. | Hypothetical protein. | 0.969 |
SFR67313.1 | SFR67291.1 | SAMN05661086_00850 | SAMN05661086_00848 | Hypothetical protein. | phosphate:Na+ symporter. | 0.489 |
SFR67313.1 | SFR67300.1 | SAMN05661086_00850 | SAMN05661086_00849 | Hypothetical protein. | Coat F domain-containing protein. | 0.969 |
pgk | SFR67280.1 | SAMN05661086_00846 | SAMN05661086_00847 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.999 |
pgk | SFR67291.1 | SAMN05661086_00846 | SAMN05661086_00848 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | phosphate:Na+ symporter. | 0.401 |