STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR72276.1Enoyl-CoA hydratase/carnithine racemase. (607 aa)    
Predicted Functional Partners:
SFR72197.1
trans-AT polyketide synthase, acyltransferase and oxidoreductase domain-containing protein.
 
 0.999
SFR72218.1
Acyl transferase domain-containing protein.
 0.999
SFR72228.1
Acyl transferase domain-containing protein.
 0.999
SFR72239.1
Ketoacyl-synthetase C-terminal extension.
 0.999
SFR98070.1
trans-AT polyketide synthase, acyltransferase and oxidoreductase domain-containing protein.
 
 0.999
SFS02400.1
Amino acid adenylation domain-containing protein.
 
 0.999
SFS02415.1
Phosphopantetheine attachment site.
 0.999
SFS02431.1
Aryl carrier domain-containing protein.
 
 0.999
SFR56165.1
SagB-type dehydrogenase domain-containing protein.
 
 0.998
SFR83662.1
Thioesterase domain-containing protein.
  
 0.998
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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