STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR72788.1Two component transcriptional regulator, LytTR family. (242 aa)    
Predicted Functional Partners:
SFR72799.1
GHKL domain-containing protein.
 
 
  0.944
SFR83084.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.906
SFS04395.1
Two-component system, sensor histidine kinase YesM.
 
 0.884
SFR65671.1
Two-component system, sensor histidine kinase YesM.
  
 
 0.828
SFR86411.1
Two-component system, sensor histidine kinase YesM.
  
 
  0.815
SFR75589.1
Two-component system, sensor histidine kinase YesM.
  
 
  0.814
SFR81954.1
GHKL domain-containing protein.
 
 
  0.810
SFS02070.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.800
SFR68825.1
Two-component system, sensor histidine kinase YesM.
  
 
  0.781
SFR73142.1
Two component transcriptional regulator, LytTR family.
  
     0.774
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.