STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR81844.1Lysophospholipase L1. (377 aa)    
Predicted Functional Partners:
SFR72758.1
Cellulose binding domain-containing protein.
  
  0.876
SFS07104.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.862
SFS03509.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
  
 0.861
SFR96852.1
Cellulose binding domain-containing protein.
 
 
 0.853
SFS10295.1
Cellulose binding domain-containing protein.
 
 
 0.853
SFR81084.1
Cellulose binding domain-containing protein.
 
  0.811
SFR99803.1
Rhamnogalacturonan endolyase.
  
 
  0.807
SFS05030.1
Cellulase (glycosyl hydrolase family 5).
  
 
  0.793
SFR98235.1
Endoglucanase.
  
 
  0.787
SFS10419.1
Glycosyl hydrolase family 62.
  
     0.768
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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