STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR84556.1Ribose transport system substrate-binding protein. (338 aa)    
Predicted Functional Partners:
SFR84543.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
   0.951
SFR84499.1
Putative multiple sugar transport system ATP-binding protein.
 
 0.950
SFS04358.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.931
SFR84521.1
D-xylose transport system substrate-binding protein.
 
 
 0.928
SFR84532.1
Two-component system, response regulator YesN.
 
  
  0.917
SFS05508.1
Two-component system, chemotaxis family, response regulator CheV.
   
 0.903
SFR69737.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.902
SFS04378.1
Simple sugar transport system ATP-binding protein.
 
 0.902
SFS04367.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.880
SFR84569.1
Hypothetical protein.
       0.773
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.