STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR86677.1ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein. (339 aa)    
Predicted Functional Partners:
SFR86659.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.999
SFR86693.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.998
SFR86708.1
Uncharacterized conserved protein YqgV, UPF0045/DUF77 family.
 
     0.936
SFR77159.1
NitT/TauT family transport system permease protein.
 
 
 0.898
SFR77145.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.896
SFR77227.1
Binding-protein-dependent transport system inner membrane component.
 
 
 0.865
SFS02400.1
Amino acid adenylation domain-containing protein.
  
 
 0.703
SFR81787.1
ABC transporter.
  
 
 0.683
SFS05508.1
Two-component system, chemotaxis family, response regulator CheV.
    
  0.591
SFR77525.1
Mobilisation protein (MobC).
  
 
 0.542
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.