STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR90766.1Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. (815 aa)    
Predicted Functional Partners:
SFR99020.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.723
SFR75556.1
Beta-galactosidase.
 
 
 0.698
SFR88700.1
Alpha galactosidase A.
  
  
  0.674
SFR78320.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
0.664
SFR90782.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.664
SFR81525.1
Beta-galactosidase.
 
 
 0.640
SFR69549.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.636
SFR63263.1
Gluconate 5-dehydrogenase.
  
 
  0.634
SFR83165.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.579
SFR88310.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.573
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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