Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR59034.1 | SFR94381.1 | SAMN05661086_00371 | SAMN05661086_02685 | Anti-sigma-28 factor, FlgM family. | Protein of unknown function. | 0.918 |
SFR94275.1 | SFR94291.1 | SAMN05661086_02673 | SAMN05661086_02675 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.905 |
SFR94275.1 | SFR94325.1 | SAMN05661086_02673 | SAMN05661086_02679 | RNA polymerase sigma factor, sigma-70 family. | Anti-repressor protein. | 0.816 |
SFR94275.1 | SFR94373.1 | SAMN05661086_02673 | SAMN05661086_02684 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.795 |
SFR94275.1 | SFR94381.1 | SAMN05661086_02673 | SAMN05661086_02685 | RNA polymerase sigma factor, sigma-70 family. | Protein of unknown function. | 0.782 |
SFR94275.1 | rpoB | SAMN05661086_02673 | SAMN05661086_00609 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.618 |
SFR94275.1 | rpoC | SAMN05661086_02673 | SAMN05661086_00610 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.640 |
SFR94291.1 | SFR94275.1 | SAMN05661086_02675 | SAMN05661086_02673 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.905 |
SFR94291.1 | SFR94325.1 | SAMN05661086_02675 | SAMN05661086_02679 | Hypothetical protein. | Anti-repressor protein. | 0.723 |
SFR94291.1 | SFR94351.1 | SAMN05661086_02675 | SAMN05661086_02682 | Hypothetical protein. | Hypothetical protein. | 0.721 |
SFR94291.1 | SFR94363.1 | SAMN05661086_02675 | SAMN05661086_02683 | Hypothetical protein. | SNF2 family N-terminal domain-containing protein. | 0.603 |
SFR94291.1 | SFR94373.1 | SAMN05661086_02675 | SAMN05661086_02684 | Hypothetical protein. | Hypothetical protein. | 0.792 |
SFR94291.1 | SFR94381.1 | SAMN05661086_02675 | SAMN05661086_02685 | Hypothetical protein. | Protein of unknown function. | 0.797 |
SFR94291.1 | SFR94389.1 | SAMN05661086_02675 | SAMN05661086_02686 | Hypothetical protein. | 5-methylcytosine-specific restriction enzyme A. | 0.403 |
SFR94325.1 | SFR94275.1 | SAMN05661086_02679 | SAMN05661086_02673 | Anti-repressor protein. | RNA polymerase sigma factor, sigma-70 family. | 0.816 |
SFR94325.1 | SFR94291.1 | SAMN05661086_02679 | SAMN05661086_02675 | Anti-repressor protein. | Hypothetical protein. | 0.723 |
SFR94325.1 | SFR94351.1 | SAMN05661086_02679 | SAMN05661086_02682 | Anti-repressor protein. | Hypothetical protein. | 0.567 |
SFR94325.1 | SFR94363.1 | SAMN05661086_02679 | SAMN05661086_02683 | Anti-repressor protein. | SNF2 family N-terminal domain-containing protein. | 0.490 |
SFR94325.1 | SFR94373.1 | SAMN05661086_02679 | SAMN05661086_02684 | Anti-repressor protein. | Hypothetical protein. | 0.748 |
SFR94325.1 | SFR94381.1 | SAMN05661086_02679 | SAMN05661086_02685 | Anti-repressor protein. | Protein of unknown function. | 0.768 |
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