Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR57923.1 | SFR75875.1 | SAMN05661086_00291 | SAMN05661086_01501 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate phosphate dikinase. | 0.965 |
SFR57923.1 | SFR82071.1 | SAMN05661086_00291 | SAMN05661086_01974 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acetolactate synthase, large subunit. | 0.965 |
SFR57923.1 | SFR84309.1 | SAMN05661086_00291 | SAMN05661086_02116 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Citrate synthase; Belongs to the citrate synthase family. | 0.965 |
SFR57923.1 | SFR84456.1 | SAMN05661086_00291 | SAMN05661086_02130 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.955 |
SFR57923.1 | SFR99118.1 | SAMN05661086_00291 | SAMN05661086_03095 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acetyl-CoA carboxylase, carboxyltransferase component. | 0.961 |
SFR57923.1 | SFR99138.1 | SAMN05661086_00291 | SAMN05661086_03097 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Biotin-requiring enzyme. | 0.952 |
SFR57923.1 | SFR99149.1 | SAMN05661086_00291 | SAMN05661086_03098 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.956 |
SFR57923.1 | SFR99160.1 | SAMN05661086_00291 | SAMN05661086_03099 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Oxaloacetate decarboxylase, alpha subunit. | 0.956 |
SFR57923.1 | SFS02262.1 | SAMN05661086_00291 | SAMN05661086_03262 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Phosphoenolpyruvate carboxykinase (ATP). | 0.952 |
SFR75875.1 | SFR57923.1 | SAMN05661086_01501 | SAMN05661086_00291 | Pyruvate phosphate dikinase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.965 |
SFR75875.1 | SFR82071.1 | SAMN05661086_01501 | SAMN05661086_01974 | Pyruvate phosphate dikinase. | Acetolactate synthase, large subunit. | 0.902 |
SFR75875.1 | SFR84456.1 | SAMN05661086_01501 | SAMN05661086_02130 | Pyruvate phosphate dikinase. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.911 |
SFR75875.1 | SFR99138.1 | SAMN05661086_01501 | SAMN05661086_03097 | Pyruvate phosphate dikinase. | Biotin-requiring enzyme. | 0.592 |
SFR75875.1 | SFR99149.1 | SAMN05661086_01501 | SAMN05661086_03098 | Pyruvate phosphate dikinase. | Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). | 0.903 |
SFR75875.1 | SFR99160.1 | SAMN05661086_01501 | SAMN05661086_03099 | Pyruvate phosphate dikinase. | Oxaloacetate decarboxylase, alpha subunit. | 0.913 |
SFR75875.1 | SFS02262.1 | SAMN05661086_01501 | SAMN05661086_03262 | Pyruvate phosphate dikinase. | Phosphoenolpyruvate carboxykinase (ATP). | 0.936 |
SFR82071.1 | SFR57923.1 | SAMN05661086_01974 | SAMN05661086_00291 | Acetolactate synthase, large subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.965 |
SFR82071.1 | SFR75875.1 | SAMN05661086_01974 | SAMN05661086_01501 | Acetolactate synthase, large subunit. | Pyruvate phosphate dikinase. | 0.902 |
SFR82071.1 | SFR84456.1 | SAMN05661086_01974 | SAMN05661086_02130 | Acetolactate synthase, large subunit. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.903 |
SFR82071.1 | SFR99138.1 | SAMN05661086_01974 | SAMN05661086_03097 | Acetolactate synthase, large subunit. | Biotin-requiring enzyme. | 0.487 |
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