STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR99160.1Oxaloacetate decarboxylase, alpha subunit. (468 aa)    
Predicted Functional Partners:
SFR99149.1
Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
 
 0.996
SFR99138.1
Biotin-requiring enzyme.
  
 0.994
SFR57923.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.956
SFR75875.1
Pyruvate phosphate dikinase.
    
 0.913
SFR84456.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
     
 0.906
SFS02262.1
Phosphoenolpyruvate carboxykinase (ATP).
    
 0.902
SFR55695.1
Formate C-acetyltransferase.
     
 0.896
SFR82071.1
Acetolactate synthase, large subunit.
     
 0.891
SFR84309.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.891
SFR90456.1
Glycerol dehydratase, cobalamin-independent, large subunit.
     
 0.873
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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