STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS07194.1Hypothetical protein. (469 aa)    
Predicted Functional Partners:
SFS07204.1
The GLUG motif-containing protein.
 
  
  0.915
SFS07218.1
The GLUG motif-containing protein.
 
  
  0.850
SFS07229.1
Hypothetical protein.
 
  
  0.820
SFR93291.1
Hypothetical protein.
  
     0.729
SFR75214.1
Hypothetical protein.
  
    0.554
SFR69202.1
Leucine rich repeat-containing protein.
  
  
  0.526
SFR83288.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.463
SFR56876.1
Coenzyme F420-reducing hydrogenase, beta subunit.
  
     0.457
SFS00968.1
Listeria/Bacterioides repeat-containing protein.
 
     0.457
SFS07187.1
Carboxynorspermidine decarboxylase.
       0.441
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.