STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS09090.1Protein of unknown function. (187 aa)    
Predicted Functional Partners:
SFS09097.1
RecB family exonuclease.
 
     0.941
SFS09108.1
Hypothetical protein.
 
     0.916
SFS09072.1
DNA polymerase.
 
     0.874
SFS09145.1
VRR-NUC domain-containing protein.
 
     0.830
SFR94318.1
DNA polymerase.
 
     0.778
SFS01560.1
Protein of unknown function.
 
     0.778
SFS08326.1
Protein of unknown function.
 
     0.778
SFS08346.1
DNA polymerase.
 
     0.778
SFR94301.1
Protein of unknown function.
 
     0.777
SFS08385.1
VRR-NUC domain-containing protein.
 
     0.777
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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