STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS09713.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SFS09704.1
Type IV secretion system protein VirD4.
       0.779
SFS09691.1
Hypothetical protein.
       0.672
SFR94576.1
Phage tail protein.
   
    0.634
SFR86164.1
Hypothetical protein.
  
     0.580
SFS09723.1
Hypothetical protein.
       0.477
SFS09735.1
Hypothetical protein.
       0.477
SFS09744.1
Hypothetical protein.
       0.477
SFR55344.1
Dynamin family protein.
  
     0.456
Your Current Organism:
Clostridium populeti
NCBI taxonomy Id: 37658
Other names: ATCC 35295, DSM 5832, [. populeti, [Clostridium] populeti, strain 743A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.